plot_projection: A function to visualize/plot a projection
In skimlab/CCSBUtils: R Utilitiy Functions for CCSB
plot_projection R Documentation
A function to visualize/plot a projection
Description
A function to visualize/plot a projection
Usage
plot_projection(se, reduction = "umap", feature_color = NA, feature_shape = NA)
Arguments
se
A SummarizedExperiment object
reduction
A name of the slot data where projection is is stored:
'umap', 'tsne' or 'pca'
feature_color
If specified, the projection will be color-coded using
the specified feature from colData(se)
feature_shape
If specified, the projection will be shape-coded using
the specified feature from colData(se)
Value
A ggplot object
skimlab/CCSBUtils documentation built on March 30, 2022, 4:52 a.m.
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| plot_projection | R Documentation |
A function to visualize/plot a projection
Description
A function to visualize/plot a projection
Usage
plot_projection(se, reduction = "umap", feature_color = NA, feature_shape = NA)
Arguments
se |
A |
reduction |
A name of the slot data where projection is is stored: 'umap', 'tsne' or 'pca' |
feature_color |
If specified, the projection will be color-coded using
the specified feature from |
feature_shape |
If specified, the projection will be shape-coded using
the specified feature from |
Value
A ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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