Files in skummerf/GenomicWidgets
interactive visualization of genomics data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE/GNE_LICENSE
NAMESPACE
NEWS
R/AllClasses.R
R/AllGenerics.R
R/GenomeTrackWidget.R
R/GenomicWidgets.R
R/bioc_iheatmap.R
R/coverage_heatmaps.R
R/coverage_matrix.R
R/heatmap_plus_tracks_shiny.R
R/locus_summary.R
R/multi_locus.R
R/plot_utils.R
R/rpkm_chr21.R
R/shiny.R
R/signal.R
R/single_locus.R
R/track_interface.R
R/track_maker.R
R/track_utils.R
R/transcripts.R
R/view_range.R
data/rpkm_chr21.rda
inst/htmlwidgets/GenomicWidgets.js
inst/htmlwidgets/GenomicWidgets.yaml
man/GenomicWidgets-shiny.Rd
man/GenomicWidgets.Rd
man/coverage_heatmap.Rd
man/fetch_view_range.Rd
man/heatmap_click.Rd
man/heatmap_to_tracks_shiny.Rd
man/iheatmap-SummarizedExperiment.Rd
man/knit_print_GenomicWidgets.Rd
man/log10rowMeans.Rd
man/make_arrows.Rd
man/make_coverage_matrix.Rd
man/make_plotly_color.Rd
man/make_rect.Rd
man/min-AnnotationPlot-method.Rd
man/normalize_coverage_matrix.Rd
man/plot_tracks.Rd
man/rpkm_chr21.Rd
man/set_summary_parameters.Rd
man/set_track_parameters.Rd
man/to_widget.Rd
man/unpack_transcripts.Rd
tests/testthat.R
tests/testthat/bw1.bw
tests/testthat/bw2.bw
tests/testthat/bw3.bw
tests/testthat/helper_expectation.R
tests/testthat/helper_objects.R
tests/testthat/reference/add_coverage_ScoreMatrix.rds
tests/testthat/reference/add_coverage_ScoreMatrixList.rds
tests/testthat/reference/add_coverage_matrix.rds
tests/testthat/reference/add_coverage_matrix_list.rds
tests/testthat/reference/add_coverage_single_se.rds
tests/testthat/reference/add_coverage_two_se.rds
tests/testthat/reference/coverage_ScoreMatrix.rds
tests/testthat/reference/coverage_ScoreMatrixList.rds
tests/testthat/reference/coverage_matrix_list.rds
tests/testthat/reference/coverage_single_matrix.rds
tests/testthat/reference/coverage_single_se.rds
tests/testthat/reference/coverage_two_se.rds
tests/testthat/reference/expression_heatmap.rds
tests/testthat/reference/expression_heatmap_basic.rds
tests/testthat/reference/expression_heatmap_double.rds
tests/testthat/reference/expression_heatmap_double_vertical.rds
tests/testthat/reference/track_multi_locus.rds
tests/testthat/reference/track_multi_locus_layout.rds
tests/testthat/reference/track_multi_locus_names.rds
tests/testthat/reference/track_multi_locus_offset.rds
tests/testthat/reference/track_multi_locus_xtitle.rds
tests/testthat/reference/track_single_locus.rds
tests/testthat/reference/track_summary_multi_locus.rds
tests/testthat/reference/track_summary_multi_locus_range_input.rds
tests/testthat/reference/track_summary_single_locus.rds
tests/testthat/reference/track_summary_single_locus_range_input.rds
tests/testthat/test_coverage_heatmap.R
tests/testthat/test_coverage_mat.R
tests/testthat/test_iheatmap_se.R
tests/testthat/test_mats.Rds
tests/testthat/test_track_summaries.R
tests/testthat/test_tracks.R
tests/view_reference.Rmd
vignettes/Introduction.Rmd
