check_epistasis: Calculate BayesFactor for Comparison between Model1 (without...
In slt666666/RILStEp: What the Package Does (One Line, Title Case)
Description
Calculate BayesFactor for Comparison between Model1 (without Epistasis) vs Model2 (with Epistasis)
Usage
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check_epistasis(
pair_index,
genotype_phenotype_dataset,
phenotype_name,
peak_qtls,
pairs
)
Arguments
pair_index
indices of SNP pair to check epistasis
genotype_phenotype_dataset
dataset of genotype and phenotype
phenotype_name
trait's name
peak_qtls
QTL-like SNP index list from extract_peak_qtls() or user specify
pairs
SNP pairs
slt666666/RILStEp documentation built on Feb. 23, 2022, 1:04 a.m.
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Description
Calculate BayesFactor for Comparison between Model1 (without Epistasis) vs Model2 (with Epistasis)
Usage
1 2 3 4 5 6 7 | check_epistasis(
pair_index,
genotype_phenotype_dataset,
phenotype_name,
peak_qtls,
pairs
)
|
Arguments
pair_index |
indices of SNP pair to check epistasis |
genotype_phenotype_dataset |
dataset of genotype and phenotype |
phenotype_name |
trait's name |
peak_qtls |
QTL-like SNP index list from extract_peak_qtls() or user specify |
pairs |
SNP pairs |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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