get_max_kmer_single: Title Get kmer which is most frequent in provided sequence
In smaegol/biostrext: Extension to Biostrings
Description
Usage
Arguments
Value
Examples
Description
Title Get kmer which is most frequent in provided sequence
Usage
1
get_max_kmer_single(x, k, force_large_kmer = FALSE)
Arguments
x
DNAString object
k
kmer length
force_large_kmer
logical, should calcualtion of large kmers be possible (but shorter than 15)
Value
named numeric, with count of given kmer and its sequence as name
Examples
1
get_max_kmer_single(Biostrings::DNAString("CAGCTGCACACATCGTACA"),3)
smaegol/biostrext documentation built on May 24, 2019, 7:25 p.m.
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Description Usage Arguments Value Examples
Description
Title Get kmer which is most frequent in provided sequence
Usage
1 | get_max_kmer_single(x, k, force_large_kmer = FALSE)
|
Arguments
x |
DNAString object |
k |
kmer length |
force_large_kmer |
logical, should calcualtion of large kmers be possible (but shorter than 15) |
Value
named numeric, with count of given kmer and its sequence as name
Examples
1 | get_max_kmer_single(Biostrings::DNAString("CAGCTGCACACATCGTACA"),3)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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