HLA: HLA region base positions

In smgogarten/GWASTools: Tools for Genome Wide Association Studies

HLA region base positions

Description

HLA region base positions from the GRCh36/hg18, GRCh37/hg19 and GRCh38/hg38 genome builds.

Usage

HLA.hg18
HLA.hg19
HLA.hg38

Format

A data.frame with the following columns.

chrom

chromsome

start.base

starting base position of region

end.base

ending base position of region

Source

UCSC genome browser (http://genome.ucsc.edu).

References

Mehra, Narinder K. and Kaur, Gurvinder (2003), MHC-based vaccination approaches: progress and perspectives. Expert Reviews in Molecular Medicine, Vol. 5: 24. doi:10.1017/S1462399403005957

Examples

data(HLA.hg18)
data(HLA.hg19)
data(HLA.hg38)

smgogarten/GWASTools documentation built on July 4, 2023, 2:32 a.m.