defunct: Defunct Functions in Package 'GWASTools'
In smgogarten/GWASTools: Tools for Genome Wide Association Studies
GWASTools-defunct R Documentation
Defunct Functions in Package ‘GWASTools’
Description
These functions are defunct and no longer available.
Details
The following functions are defunct; use the replacement indicated below:
pedigreeClean: pedigreeCheck
pedigreeFindDuplicates: pedigreeCheck
ncdfCreate: createDataFile
ncdfAddData: createDataFile
ncdfAddIntensity: createAffyIntensityFile
ncdfCheckGenotype: checkGenotypeFile
ncdfCheckIntensity: checkIntensityFile
ncdfSetMissingGenotypes: setMissingGenotypes
gdsSetMissingGenotypes: setMissingGenotypes
ncdfImputedDosage: imputedDosageFile
gdsImputedDosage: imputedDosageFile
gdsCheckImputedDosage: checkImputedDosageFile
assocTestRegression: assocRegression
assocTestCPH: assocCoxPH
assocTestFisherExact: batchFisherTest
gwasExactHW: exactHWE
ncdfSubset: gdsSubset
ncdfSubsetCheck: gdsSubsetCheck
plinkToNcdf: snpgdsBED2GDS
convertVcfGds: snpgdsVCF2GDS
smgogarten/GWASTools documentation built on Nov. 10, 2024, 9:54 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| GWASTools-defunct | R Documentation |
Defunct Functions in Package ‘GWASTools’
Description
These functions are defunct and no longer available.
Details
The following functions are defunct; use the replacement indicated below:
pedigreeClean:pedigreeCheckpedigreeFindDuplicates:pedigreeCheckncdfCreate:createDataFilencdfAddData:createDataFilencdfAddIntensity:createAffyIntensityFilencdfCheckGenotype:checkGenotypeFilencdfCheckIntensity:checkIntensityFilencdfSetMissingGenotypes:setMissingGenotypesgdsSetMissingGenotypes:setMissingGenotypesncdfImputedDosage:imputedDosageFilegdsImputedDosage:imputedDosageFilegdsCheckImputedDosage:checkImputedDosageFileassocTestRegression:assocRegressionassocTestCPH:assocCoxPHassocTestFisherExact:batchFisherTestgwasExactHW:exactHWEncdfSubset:gdsSubsetncdfSubsetCheck:gdsSubsetCheckplinkToNcdf:snpgdsBED2GDSconvertVcfGds:snpgdsVCF2GDS
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.