Files in snjy9182/smt
Single Molecule Tracking
.Rbuildignore
.gitignore
CHANGELOG.md
DESCRIPTION
GUIDES/smt Pipeline.png
GUIDES/smt-Shiny-Interface-guide.Rmd
GUIDES/smt-Shiny-Interface-guide.html
GUIDES/trackll-Manipulation-Guide.Rmd
GUIDES/trackll-Manipulation-Guide.html
GUIDES/trackll-Manipulation-Guide.pdf
NAMESPACE
R/Dcoef.Helpers.R
R/Dcoef.R
R/DisplacementCDF.R
R/Plotting.Helpers.R
R/combineTrackll.R
R/compare.RT.CDF.R
R/compareFolder.R
R/createTrackll.R
R/densityMaskTracks.R
R/dwellTime.R
R/exportTrackll.R
R/filterTrack.R
R/fitCDF.R
R/fitNormDistr.R
R/fitResidenceTime.R
R/helperFunctions.R
R/linkSkippedFrames.R
R/maskTracks.R
R/mergeTracks.R
R/msd.R
R/plotLocalizations.Dense.R
R/plotTrack.R
R/plotTrackOverlay.Dcoef.R
R/preference.R
R/readDiaSessions.R
R/readDiatrack.R
R/readParticleTracker.R
R/readSlimFast.R
R/selComponentTracks.R
R/smt.R
R/squareDisp.R
build/vignette.rds
inst/cpp/squareDispRcpp.cpp
inst/doc/smt-vignette.R
inst/doc/smt-vignette.Rmd
inst/doc/smt-vignette.html
inst/doc/smt-vignette.pdf
inst/extdata/HTZ1/HTZ1_140mW_WT.txt
inst/extdata/INDEX/IndexFile.csv
inst/extdata/INDEX/componentTrackID-SWR1.comp.1.csv
inst/extdata/INDEX/componentTrackID-SWR1.comp.2.csv
inst/extdata/INDEX/indexFile2.csv
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1.tif.csv
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_MASK.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_1_Nuclei.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2.tif.csv
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_MASK.tif
inst/extdata/ImageJ/epl11AA_HTZ1Halo_No_RAP_fr10ms_120mW_2_Nuclei.tif
inst/extdata/PREF/profile.csv
inst/extdata/SWR1/SWR1_WT_140mW_image6.txt
inst/extdata/SWR1/SWR1_WT_140mW_image6_MASK.tif
inst/extdata/SWR1/SWR1_WT_140mW_image6_Nuclei.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image6.txt
inst/extdata/SWR1_2/SWR1_WT_140mW_image6_MASK.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image6_Nuclei.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image7.txt
inst/extdata/SWR1_2/SWR1_WT_140mW_image7_MASK.tif
inst/extdata/SWR1_2/SWR1_WT_140mW_image7_Nuclei.tif
inst/myapp/helpers.R
inst/myapp/rsconnect/shinyapps.io/sunjay-yoo/shiny-smt-040.dcf
inst/myapp/server.R
inst/myapp/ui.R
inst/myapp/www/ajax-loader-bar.gif
man/Dcoef-methods.Rd
man/combineTrackll-methods.Rd
man/compare.RT.CDF-methods.Rd
man/compareFolder-methods.Rd
man/createTrackll-methods.Rd
man/densityMaskTracks-methods.Rd
man/displacementCDF-methods.Rd
man/dwellTime-methods.Rd
man/exportTrackll-methods.Rd
man/filterTrack-methods.Rd
man/fitCDF-methods.Rd
man/fitNormDistr-methods.Rd
man/fitRT-methods.Rd
man/linkSkippedFrames-methods.Rd
man/maskTracks-methods.Rd
man/mergeTracks-methods.Rd
man/msd-methods.Rd
man/plotLocalizations.Dense-methods.Rd
man/plotTrack-methods.Rd
man/plotTrackOverlay.Dcoef-methods.Rd
man/readDiaSessions-methods.Rd
man/readDiatrack-methods.Rd
man/readParticleTracker-methods.Rd
man/readSlimFast-methods.Rd
man/selComponentTracks-methods.Rd
man/smt.Rd
smt-beta-0.3.9.1.Rproj
vignettes/smt-vignette.Rmd
