.Rbuildignore
.github/.gitignore
.github/CODE_OF_CONDUCT.md
.github/CONTRIBUTING.md
.github/ISSUE_TEMPLATE/issue_template.md
.github/SUPPORT.md
.github/_workflows/R-CMD-check.yaml
.github/_workflows/pr-commands.yaml
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R.ignore/example-netCDF.R
R.ignore/export_sql_db.sh
R.ignore/maarten-reconstructions.R
R.ignore/smpdsv2_climate_reconstruction.R
R/data.R
R/print.R
R/smpds-package.R
R/sysdata.rda
R/utils-biome.R
R/utils-climate.R
R/utils-data.R
R/utils-dataset.R
R/utils-db.R
R/utils-interpolation.R
R/utils-parallel.R
R/utils-pipe.R
R/utils-plot.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
cran-comments.md
data-raw/AMSS.R
data-raw/APD.R
data-raw/CMPD.R
data-raw/CRU_coords.R
data-raw/DEM.R
data-raw/EMBSeCBIO.R
data-raw/EMPDv2.R
data-raw/EPD.R
data-raw/GLOBAL/AMSS_2022-04-25.xlsx
data-raw/GLOBAL/APD_2022-04-22.xlsx
data-raw/GLOBAL/APD_clean_SPH.xlsx
data-raw/GLOBAL/APD_modern-references.csv
data-raw/GLOBAL/APD_modern-references_clean.csv
data-raw/GLOBAL/AUSTRALIA/Post 1900_Australia.xlsx
data-raw/GLOBAL/AUSTRALIA/Post 1900_Australia2.xlsx
data-raw/GLOBAL/AUSTRALIA/Post 1900_Australia3.xlsx
data-raw/GLOBAL/A_SMPDSv1_Iberia and EMBSECBIO cleanup done.xlsx
data-raw/GLOBAL/African modern surface samples_SPH.xlsx
data-raw/GLOBAL/CMPD_2022-04-22.xlsx
data-raw/GLOBAL/CMPD_clean_SPH.xlsx
data-raw/GLOBAL/CMPD_modern-references.csv
data-raw/GLOBAL/CMPD_modern-references_clean.csv
data-raw/GLOBAL/C_Iberian data_clean.xlsx
data-raw/GLOBAL/Castor's sites.xlsx
data-raw/GLOBAL/D_embsecbio_records_additions_SPH.xlsx
data-raw/GLOBAL/Dugerdil_SPH.xlsx
data-raw/GLOBAL/EMBSeCBIO_2022-05-11.xlsx
data-raw/GLOBAL/EMBSeCBIO_modern-references.csv
data-raw/GLOBAL/EMBSeCBIO_modern-references_clean.csv
data-raw/GLOBAL/EMPDv2_2022-05-16.xlsx
data-raw/GLOBAL/EMPDv2_elevations_only.csv
data-raw/GLOBAL/EMPDv2_modern-references.csv
data-raw/GLOBAL/EMPDv2_modern-references_clean.csv
data-raw/GLOBAL/EMPDv2_only_SPH_clean_no dups.xlsx
data-raw/GLOBAL/EMPDv2_only_SPH_clean_no dups_actions_for_entities_with_zeros_in_elevation.xlsx
data-raw/GLOBAL/E_additional_Europe_clean.xlsx
data-raw/GLOBAL/Gaillard et al_SPH.xlsx
data-raw/GLOBAL/Herzschuh_2022-04-22.xlsx
data-raw/GLOBAL/Herzschuh_clean_no dups_SPH.xlsx
data-raw/GLOBAL/Herzschuh_modern-references.csv
data-raw/GLOBAL/Herzschuh_modern-references_clean.csv
data-raw/GLOBAL/IbMPD_2022-05-12.xlsx
data-raw/GLOBAL/Latin America/Latin American modern 2008.xls
data-raw/GLOBAL/Latin America/Latin American modern 2008_SPH_cleaned.xls
data-raw/GLOBAL/Moroccan core tops_SPH.xlsx
data-raw/GLOBAL/NEOTOMA_2022-04-22.xlsx
data-raw/GLOBAL/NEOTOMA_modern-references.csv
data-raw/GLOBAL/NEOTOMA_modern-references_clean.csv
data-raw/GLOBAL/Neotoma_extras_SPH.xlsx
data-raw/GLOBAL/Neotropics_surface samples_SPH.xlsx
data-raw/GLOBAL/Phelps_2021-09-24_version 2_clean_SPH.xlsx
data-raw/GLOBAL/Phelps_2022-04-20.xlsx
data-raw/GLOBAL/Phelps_modern-references.csv
data-raw/GLOBAL/Phelps_modern-references_clean.csv
data-raw/GLOBAL/SMPDSv1_modern-references.csv
data-raw/GLOBAL/SMPDSv1_modern-references_clean.csv
data-raw/GLOBAL/Tatiana_samples_SPH.xlsx
data-raw/GLOBAL/Taxonomic corrections.docx
data-raw/GLOBAL/additional_european_pollen_2022-05-11.xlsx
data-raw/GLOBAL/additional_surface_samples_DUCKPOND.xlsx
data-raw/GLOBAL/african_modern_samples_modern-references.csv
data-raw/GLOBAL/african_modern_samples_modern-references_clean.csv
data-raw/GLOBAL/castor_pollen_empdv2.csv
data-raw/GLOBAL/dugerdil_modern-references.csv
data-raw/GLOBAL/dugerdil_modern-references_clean.csv
data-raw/GLOBAL/dugerdil_pollen_2022-05-04.xlsx
data-raw/GLOBAL/gaillard_pollen_2022-04-22.xlsx
data-raw/GLOBAL/gaillard_samples_modern-references.csv
data-raw/GLOBAL/gaillard_samples_modern-references_clean.csv
data-raw/GLOBAL/japanese_pollen/JPND01_clean_SPH.xlsx
data-raw/GLOBAL/japanese_pollen/JPND02_clean_SPH.xlsx
data-raw/GLOBAL/japanese_pollen/JPND03_clean_SPH.xlsx
data-raw/GLOBAL/japanese_pollen/Japan sites.xlsx
data-raw/GLOBAL/japanese_pollen/Japan0k_Morita_SPH_clean.xlsx
data-raw/GLOBAL/japanese_pollen/Japan_dat files_clean_SPH.xlsx
data-raw/GLOBAL/japanese_pollen_2022-05-12.xlsx
data-raw/GLOBAL/japanese_pollen_modern-references.csv
data-raw/GLOBAL/japanese_pollen_modern-references_clean.csv
data-raw/GLOBAL/moroccan_coretops_modern-references.csv
data-raw/GLOBAL/moroccan_coretops_modern-references_clean.csv
data-raw/GLOBAL/moroccan_pollen_2022-04-22.xlsx
data-raw/GLOBAL/neotoma_north_america_modern_2022-04-05_SPH.xlsx
data-raw/GLOBAL/neotoma_north_america_modern_2022-04-20_pollen_surface_only_SPH.xlsx
data-raw/GLOBAL/neotoma_north_america_pollen_2021-10-25.xlsx
data-raw/GLOBAL/neotoma_north_america_pollen_modern-references.csv
data-raw/GLOBAL/neotoma_north_america_pollen_modern-references_clean.csv
data-raw/GLOBAL/neotoma_north_america_pollen_surface_modern-references.csv
data-raw/GLOBAL/neotoma_north_america_pollen_surface_modern-references_clean.csv
data-raw/GLOBAL/neotoma_south_america_pollen_2021-10-22.xlsx
data-raw/GLOBAL/neotoma_south_america_pollen_modern-references.csv
data-raw/GLOBAL/neotoma_south_america_pollen_modern-references.xlsx
data-raw/GLOBAL/neotoma_south_america_pollen_modern-references_.csv
data-raw/GLOBAL/neotoma_south_america_pollen_modern-references_clean.csv
data-raw/GLOBAL/neotoma_south_america_pollen_modern_SPH.xlsx
data-raw/GLOBAL/neotropics_pollen_2022-04-22.xlsx
data-raw/GLOBAL/neotropics_samples_modern-references.csv
data-raw/GLOBAL/neotropics_samples_modern-references_clean.csv
data-raw/GLOBAL/north_america_pollen_2022-04-21.xlsx
data-raw/GLOBAL/other_southern_hemisphere_SPH.xlsx
data-raw/GLOBAL/other_southern_hemisphere_modern-references.csv
data-raw/GLOBAL/other_southern_hemisphere_modern-references_clean.csv
data-raw/GLOBAL/smpdsv2_categorical_variables_counts_SPH.xlsx
data-raw/GLOBAL/south_america_pollen_2022-04-11.xlsx
data-raw/GLOBAL/southern_hemisphere_pollen_2022-04-19.xlsx
data-raw/GLOBAL/tatiana_pollen_2022-04-22.xlsx
data-raw/GLOBAL/tatiana_samples_modern-references.csv
data-raw/GLOBAL/tatiana_samples_modern-references_clean.csv
data-raw/GLOBAL/taxonomic_corrections.xlsx
data-raw/Herzschuh.R
data-raw/IbMPD.R
data-raw/ItMPD.R
data-raw/LAMPD.R
data-raw/NEOTOMA.R
data-raw/PNV.R
data-raw/Phelps.R
data-raw/SMPDSv1.R
data-raw/SMPDSv2.R
data-raw/SSMPD.R
data-raw/additional-datasets.R
data-raw/additional_european_pollen.R
data-raw/australia_pollen.R
data-raw/create_smpdsv2.R
data-raw/dugerdil_pollen.R
data-raw/dump_all.R
data-raw/epd-records-extracted-from-neotoma_dates_2022-01-26.csv
data-raw/epd-records-extracted-from-neotoma_dates_2022-01-27.csv
data-raw/epd-records-extracted-from-neotoma_dates_2022-01-27_SPH.xlsx
data-raw/epd-records-extracted-from-neotoma_meta_2022-01-25.csv
data-raw/epd-records-extracted-from-neotoma_metadata_2022-01-26.csv
data-raw/epd-records-extracted-from-neotoma_metadata_2022-01-27.csv
data-raw/epd-records-extracted-from-neotoma_publications_2022-01-21.csv
data-raw/epd-records-extracted-from-neotoma_publications_2022-01-25.csv
data-raw/epd-records-extracted-from-neotoma_publications_2022-01-26.csv
data-raw/epd-records-extracted-from-neotoma_publications_2022-01-27.csv
data-raw/gaillard_pollen.R
data-raw/global_grid.R
data-raw/japanese_pollen.R
data-raw/latin_america_pollen.R
data-raw/moroccan_pollen.R
data-raw/neotoma-epd-sites.csv
data-raw/neotoma_north_america_pollen.R
data-raw/neotoma_north_america_pollen_2021-10-25.xlsx
data-raw/neotoma_south_america_pollen.R
data-raw/neotoma_south_america_pollen_2021-10-22.xlsx
data-raw/neotropics_pollen.R
data-raw/other_southern_hemisphere.R
data-raw/reconstructions/AMSS_climate_reconstructions_2022-04-28.csv
data-raw/reconstructions/AMSS_climate_reconstructions_cld_2022-04-28.csv
data-raw/reconstructions/AMSS_climate_reconstructions_pre_2022-04-28.csv
data-raw/reconstructions/AMSS_climate_reconstructions_tmp_2022-04-28.csv
data-raw/reconstructions/APD_climate_reconstructions_2022-04-28.csv
data-raw/reconstructions/APD_climate_reconstructions_cld_2022-04-28.csv
data-raw/reconstructions/APD_climate_reconstructions_pre_2022-04-28.csv
data-raw/reconstructions/APD_climate_reconstructions_tmp_2022-04-28.csv
data-raw/reconstructions/CMPD_climate_reconstructions_2022-04-30.csv
data-raw/reconstructions/CMPD_climate_reconstructions_cld_2022-04-30.csv
data-raw/reconstructions/CMPD_climate_reconstructions_pre_2022-04-30.csv
data-raw/reconstructions/CMPD_climate_reconstructions_tmp_2022-04-30.csv
data-raw/reconstructions/EMBSeCBIO_climate_reconstructions_2022-05-12.csv
data-raw/reconstructions/EMBSeCBIO_climate_reconstructions_cld_2022-05-12.csv
data-raw/reconstructions/EMBSeCBIO_climate_reconstructions_pre_2022-05-12.csv
data-raw/reconstructions/EMBSeCBIO_climate_reconstructions_tmp_2022-05-12.csv
data-raw/reconstructions/EMPDv2_climate_reconstructions_2022-05-13.csv
data-raw/reconstructions/EMPDv2_climate_reconstructions_cld_2022-05-13.csv
data-raw/reconstructions/EMPDv2_climate_reconstructions_pre_2022-05-13.csv
data-raw/reconstructions/EMPDv2_climate_reconstructions_tmp_2022-05-13.csv
data-raw/reconstructions/IbMPD_climate_reconstructions_2022-05-12.csv
data-raw/reconstructions/IbMPD_climate_reconstructions_cld_2022-05-12.csv
data-raw/reconstructions/IbMPD_climate_reconstructions_pre_2022-05-12.csv
data-raw/reconstructions/IbMPD_climate_reconstructions_tmp_2022-05-12.csv
data-raw/reconstructions/SMPDSv1_climate_reconstructions_2022-05-12.csv
data-raw/reconstructions/SMPDSv1_climate_reconstructions_cld_2022-05-12.csv
data-raw/reconstructions/SMPDSv1_climate_reconstructions_pre_2022-05-12.csv
data-raw/reconstructions/SMPDSv1_climate_reconstructions_tmp_2022-05-12.csv
data-raw/reconstructions/additional_european_pollen_climate_reconstructions_2022-05-12.csv
data-raw/reconstructions/additional_european_pollen_climate_reconstructions_cld_2022-05-12.csv
data-raw/reconstructions/additional_european_pollen_climate_reconstructions_pre_2022-05-12.csv
data-raw/reconstructions/additional_european_pollen_climate_reconstructions_tmp_2022-05-12.csv
data-raw/reconstructions/australia_pollen_climate_reconstructions_2022-04-30.csv
data-raw/reconstructions/australia_pollen_climate_reconstructions_cld_2022-04-30.csv
data-raw/reconstructions/australia_pollen_climate_reconstructions_pre_2022-04-30.csv
data-raw/reconstructions/australia_pollen_climate_reconstructions_tmp_2022-04-30.csv
data-raw/reconstructions/castor_pollen_empdv2_climate_reconstructions_2022-05-17.csv
data-raw/reconstructions/castor_pollen_empdv2_climate_reconstructions_cld_2022-05-17.csv
data-raw/reconstructions/castor_pollen_empdv2_climate_reconstructions_pre_2022-05-17.csv
data-raw/reconstructions/castor_pollen_empdv2_climate_reconstructions_tmp_2022-05-17.csv
data-raw/reconstructions/dugerdil_pollen_climate_reconstructions_2022-05-04.csv
data-raw/reconstructions/dugerdil_pollen_climate_reconstructions_cld_2022-05-04.csv
data-raw/reconstructions/dugerdil_pollen_climate_reconstructions_pre_2022-05-04.csv
data-raw/reconstructions/dugerdil_pollen_climate_reconstructions_tmp_2022-05-04.csv
data-raw/reconstructions/embsecbio_climate_reconstructions_2022-04-28.csv
data-raw/reconstructions/embsecbio_climate_reconstructions_cld_2022-04-28.csv
data-raw/reconstructions/embsecbio_climate_reconstructions_pre_2022-04-28.csv
data-raw/reconstructions/embsecbio_climate_reconstructions_tmp_2022-04-28.csv
data-raw/reconstructions/gaillard_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/gaillard_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/gaillard_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/gaillard_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/herzschuh_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/herzschuh_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/herzschuh_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/herzschuh_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/japanese_pollen_climate_reconstructions_2022-05-12.csv
data-raw/reconstructions/japanese_pollen_climate_reconstructions_cld_2022-05-12.csv
data-raw/reconstructions/japanese_pollen_climate_reconstructions_pre_2022-05-12.csv
data-raw/reconstructions/japanese_pollen_climate_reconstructions_tmp_2022-05-12.csv
data-raw/reconstructions/moroccan_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/moroccan_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/moroccan_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/moroccan_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/neotoma_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/neotoma_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/neotoma_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/neotoma_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/neotropics_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/neotropics_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/neotropics_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/neotropics_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/north_america_pollen_climate_reconstructions_2022-04-30.csv
data-raw/reconstructions/north_america_pollen_climate_reconstructions_cld_2022-04-30.csv
data-raw/reconstructions/north_america_pollen_climate_reconstructions_pre_2022-04-30.csv
data-raw/reconstructions/north_america_pollen_climate_reconstructions_tmp_2022-04-30.csv
data-raw/reconstructions/phelps_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/phelps_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/phelps_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/phelps_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/smpdsv2_2022-04-30.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions.R
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_2022-05-25.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_2022-05-25_.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_2022-05-25_z_buffer_2.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_2022-05-25_z_buffer_na.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_2022-05-30.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_cld_2022-05-25_.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_cld_2022-05-25_z_buffer_2.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_cld_2022-05-25_z_buffer_na.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_cld_2022-05-30.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_pre_2022-05-25_.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_pre_2022-05-25_z_buffer_2.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_pre_2022-05-25_z_buffer_na.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_pre_2022-05-30.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_tmp_2022-05-25_.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_tmp_2022-05-25_z_buffer_2.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_tmp_2022-05-25_z_buffer_na.csv
data-raw/reconstructions/smpdsv2_sites_with_dodgy_climate_reconstructions_climate_reconstructions_tmp_2022-05-30.csv
data-raw/reconstructions/south_america_pollen_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/south_america_pollen_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/south_america_pollen_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/south_america_pollen_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/southern_hemisphere_pollen_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/southern_hemisphere_pollen_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/southern_hemisphere_pollen_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/southern_hemisphere_pollen_climate_reconstructions_tmp_2022-04-29.csv
data-raw/reconstructions/tatiana_pollen_climate_reconstructions_2022-04-29.csv
data-raw/reconstructions/tatiana_pollen_climate_reconstructions_cld_2022-04-29.csv
data-raw/reconstructions/tatiana_pollen_climate_reconstructions_pre_2022-04-29.csv
data-raw/reconstructions/tatiana_pollen_climate_reconstructions_tmp_2022-04-29.csv
data-raw/smpdsv2_pollen_amalgamations.csv
data-raw/smpdsv2_pollen_amalgamations_2022-05-25.csv
data-raw/smpdsv2_sites_with_dodgy_climate_reconstructions_2022-05-25.csv
data-raw/smpdsv2_sites_with_dodgy_climate_reconstructions_2022-05-25_SPH.xlsx
data-raw/snapshots/SMPDSv2_2022-05-31.sql
data-raw/southern_hemisphere_pollen.R
data-raw/tatiana_pollen.R
data-raw/taxa.R
data-raw/taxon_exclusions.xlsx
data/AMSS.rda
data/APD.rda
data/CMPD.rda
data/CRU_coords.rda
data/EMBSeCBIO.rda
data/EMPDv2.rda
data/Herzschuh.rda
data/IbMPD.rda
data/NEOTOMA.rda
data/PNV_1km.rda
data/Phelps.rda
data/SMPDSv1.rda
data/SMPDSv2.rda
data/additional_european_pollen.rda
data/australia_pollen.rda
data/climate.rda
data/dugerdil_pollen.rda
data/entity.rda
data/gaillard_pollen.rda
data/japanese_pollen.rda
data/moroccan_pollen.rda
data/neotropics_pollen.rda
data/north_america_pollen.rda
data/pollen_count.rda
data/south_america_pollen.rda
data/southern_hemisphere_pollen.rda
data/tatiana_pollen.rda
data/taxon_name.rda
inst/REFERENCES.bib
inst/extdata/all_taxa.csv
inst/extdata/apd_taxa.csv
inst/extdata/cmpd_counts.xlsx
inst/extdata/cmpd_metadata.xlsx
inst/extdata/cmpd_taxa.csv
inst/extdata/embsecbio_counts.csv
inst/extdata/embsecbio_metadata.csv
inst/extdata/embsecbio_taxa.csv
inst/extdata/empdv2.xlsx
inst/extdata/empdv2_taxa.csv
inst/extdata/epdcore_finsinger.csv
inst/extdata/epdcore_finsinger_taxa.csv
inst/extdata/feurdeana3_epdcoretop.csv
inst/extdata/feurdeana3_epdcoretop_taxa.csv
inst/extdata/herzschuh_taxa.csv
inst/extdata/juodonys.csv
inst/extdata/juodonys_taxa.csv
inst/extdata/neotoma_count.csv
inst/extdata/neotoma_metadata.csv
inst/extdata/neotoma_taxa.csv
inst/extdata/petresiunai.csv
inst/extdata/petresiunai_taxa.csv
inst/extdata/phelps_taxa.csv
inst/extdata/spanish_sites.csv
inst/extdata/ssmpd.xlsx
inst/extdata/ssmpd_metadata.csv
inst/extdata/ssmpd_taxa.csv
inst/extdata/taxa_clean.csv
inst/extdocs/README.docx
inst/extdocs/a1-create_cru_ts_climatologies.Rmd
inst/extdocs/a1-create_cru_ts_climatologies.docx
inst/extdocs/a2-climate-and-pnv-reconstructions.Rmd
inst/extdocs/a2-climate-and-pnv-reconstructions.docx
inst/extdocs/table1-list-of-pollen-taxa.docx
inst/images/logo.png
inst/images/pollen.png
inst/references/pnv_biome.type_biome00k_c_1km_s0..0cm_2000..2017_v0.1.tif
inst/testdata/test_data_365days.Rds
inst/testdata/test_data_counts.Rds
inst/testdata/test_data_metadata_A.Rds
inst/testdata/test_data_metadata_B.Rds
man/AMSS.Rd
man/APD.Rd
man/CMPD.Rd
man/CRU_coords.Rd
man/EMBSeCBIO.Rd
man/EMPDv2.Rd
man/Herzschuh.Rd
man/IbMPD.Rd
man/NEOTOMA.Rd
man/PNV_1km.Rd
man/Phelps.Rd
man/SMPDSv1.Rd
man/SMPDSv2.Rd
man/additional_european_pollen.Rd
man/amalgamate_taxa.Rd
man/australia_pollen.Rd
man/biome_name.Rd
man/clean_taxa.Rd
man/climate.Rd
man/compare_latlon.Rd
man/compare_latlonelv.Rd
man/cru_mask.Rd
man/dugerdil_pollen.Rd
man/entity.Rd
man/extract_biome.Rd
man/figures/README-example-plot-1.png
man/figures/README-example-plot-gdd0-1.png
man/figures/README-example-plot-mi-1.png
man/figures/README-example-plot-mtco-1.png
man/gaillard_pollen.Rd
man/gdd.Rd
man/gwr.Rd
man/japanese_pollen.Rd
man/mask_nc.Rd
man/mat.Rd
man/mi.Rd
man/moroccan_pollen.Rd
man/mtco.Rd
man/mtwa.Rd
man/neotropics_pollen.Rd
man/normalise_taxa.Rd
man/north_america_pollen.Rd
man/pb.Rd
man/pipe.Rd
man/pivot_data.Rd
man/plot_biome.Rd
man/plot_climate.Rd
man/pnv_classes.Rd
man/pollen_count.Rd
man/print.Rd
man/process_apd.Rd
man/rm_na_taxa.Rd
man/rm_zero_taxa.Rd
man/smpds-package.Rd
man/snapshot.Rd
man/sort_taxa.Rd
man/south_america_pollen.Rd
man/southern_hemisphere_pollen.Rd
man/subset_coords.Rd
man/tatiana_pollen.Rd
man/taxon_name.Rd
man/total_taxa.Rd
man/tps.Rd
man/write_csvs.Rd
man/zissou1_palette.Rd
smpds.Rproj
tests/testthat.R
tests/testthat/test-biome_name.R
tests/testthat/test-compare_latlon.R
tests/testthat/test-compare_latlonelv.R
tests/testthat/test-cru_mask.R
tests/testthat/test-extract_biome.R
tests/testthat/test-gdd.R
tests/testthat/test-mat.R
tests/testthat/test-mi.R
tests/testthat/test-mtco.R
tests/testthat/test-mtwa.R
tests/testthat/test-normalise_taxa.R
tests/testthat/test-parallel_extract_biome.R
tests/testthat/test-plot_biome.R
tests/testthat/test-plot_climate.R
tests/testthat/test-plot_gdd.R
tests/testthat/test-plot_mat.R
tests/testthat/test-plot_mi.R
tests/testthat/test-plot_mtco.R
tests/testthat/test-plot_mtwa.R
tests/testthat/test-process_apd.R
tests/testthat/test-rm_na_taxa.R
tests/testthat/test-rm_zero_taxa.R
tests/testthat/test-sort_taxa.R
tests/testthat/test-total_taxa.R