get_FCS: FCS File Importer

In ssmpsn2/flowAssist: User friendly manipulation and analysis of flow cytometry data

Description

Generic function for pulling in FCS files and returning a list of flow frames. Default behavior is to import all .fcs files in the working directory. Names each element of the list using the associated file name, minus the ".fcs" file extension.

Usage

get_FCS(pattern, path, asDF = FALSE)

Arguments

pattern	(Optional) Character string designating a file name pattern. Only files that match the pattern will be imported.
path	(Optional) Character string designating the file path in which to look for FCS files
asDF	Logical value representing whether or not to convert the incoming FCS files to dataframes, instead of flow frames. Defaults to FALSE.

Value

A list of data frames or flow frames.

ssmpsn2/flowAssist documentation built on May 30, 2019, 7:12 p.m.