Einecke2010Kidney: Kidney transplant gene expression data from Einecke et al....

In statOmics/HDDAData: Datasets for the High Dimensional Data Analysis course

Kidney transplant gene expression data from Einecke et al. (2010)

Description

Gene expression data from patients receiving kidney transplantation, measured using microarrays. The original data consists of 54675 genes from 282 patients. This data set contains a random subset of 250 patients and 10.000 of the 25% most variable genes. For each patient, the rejection status of the kidney transplant is recorded as well as the expression levels of each gene.

Usage

data(Einecke2010Kidney)

Format

A data.frame with patients (250) as rows and 10.001 features as columns:

• Reject_Status: Binary variable indicating whether the transplanted kidney was rejected (1) or not (0).

• Remaining: gene expression levels for 10.000 genes. These were randomly selected from the 25% most variable genes in the original data

References

Einecke, G. et al. (2010) "A molecular classifier for predicting future graft loss in late kidney transplant biopsies", The Journal of Clinical Investigation, 120(6), pp. 1862–1872. doi:10.1172/JCI41789.

statOmics/HDDAData documentation built on Nov. 9, 2022, 9:29 a.m.