R/data.R

In statOmics/zingeR: Zero-Inflated Negative binomial Gene Expression in R

#' single-cell gene expression in mouse fibroblasts and embryonic stem cells (islam).
#'
#' The Islam dataset considers $44$ embryonic fibroblasts and $48$ embryonic stem cells in mouse. The original dataset was downloaded from the Gene Expression Omnibus (https://www.ncbi.nlm.nih.gov/geo) with accession number GSE29087. Control wells and genes with positive counts in fewer than 5 cells were removed.
#'
#' @references
#' Saiful Islam, Una Kja ̈llquist, Annalena Moliner, Pawel Zajac, Jian-Bing Fan, Peter L ̈onnerberg, and Sten Linnarsson. Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq. Genome research, 21(7):1160–7, jul 2011.
"islamEset"