BLOSUM62: BLOSUM62 matrix
In ste-depo/LowMACA: LowMACA - Low frequency Mutation Analysis via Consensus Alignment
BLOSUM62 R Documentation
BLOSUM62 matrix
Description
A substitution matrix used for sequence alignment of proteins.
In LowMACA, it is used to calculate the trident conservation score.
Usage
data("BLOSUM62")
Format
A squared numeric matrix with aminoacids as rownames and colnames
Source
Examples
#Load BLOSUM62 and show its structure
data(BLOSUM62)
str(BLOSUM62)
ste-depo/LowMACA documentation built on Oct. 15, 2022, 11:53 p.m.
R Package Documentation
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| BLOSUM62 | R Documentation |
BLOSUM62 matrix
Description
A substitution matrix used for sequence alignment of proteins. In LowMACA, it is used to calculate the trident conservation score.
Usage
data("BLOSUM62")
Format
A squared numeric matrix with aminoacids as rownames and colnames
Source
Examples
#Load BLOSUM62 and show its structure data(BLOSUM62) str(BLOSUM62)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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