bpAll: Draw a mutation barplot
In ste-depo/LowMACA: LowMACA - Low frequency Mutation Analysis via Consensus Alignment
bpAll R Documentation
Draw a mutation barplot
Description
bpAll draws a stacked barplot of the mutations mapped on the consensus sequence
Usage
bpAll(object)
Arguments
object
an object of class LowMACA
Details
Returns a barplot in which mutations are stacked per position
on the consensus sequence. Every color represent mutations taht map
on the same input sequence (either a protein or a pfam)
The LowMACA object must pass through the methods
alignSequences , getMutations , mapMutations
Value
NULL
Author(s)
Stefano de Pretis , Giorgio Melloni
See Also
lmPlot
Examples
#Load homeobox example and draw plot
data(lmObj)
lmObj <- entropy(lmObj)
bpAll(lmObj)
ste-depo/LowMACA documentation built on Oct. 15, 2022, 11:53 p.m.
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| bpAll | R Documentation |
Draw a mutation barplot
Description
bpAll draws a stacked barplot of the mutations mapped on the consensus sequence
Usage
bpAll(object)
Arguments
object |
an object of class LowMACA |
Details
Returns a barplot in which mutations are stacked per position
on the consensus sequence. Every color represent mutations taht map
on the same input sequence (either a protein or a pfam)
The LowMACA object must pass through the methods
alignSequences , getMutations , mapMutations
Value
NULL
Author(s)
Stefano de Pretis , Giorgio Melloni
See Also
lmPlot
Examples
#Load homeobox example and draw plot data(lmObj) lmObj <- entropy(lmObj) bpAll(lmObj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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