Stijn - please help here!
1 | analyzeCDR3(x, fname = "6_Junction.txt", OK = NULL)
|
x |
the IMGThelper object |
fname |
the absolute position of the Junction file to analyze ( default( file.path(x$path, 6_Junction.txt'))) |
OK |
which rows to process (default which(data$V.DOMAIN.Functionality == 'productive' & ! data$D.GENE.and.allele == "" & ! data$CDR3.IMGT == "" & ! data$CDR3.IMGT == "NA")) |
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