analyzeCDR3-methods: description of function analyzeCDR3

Description Usage Arguments

Description

Stijn - please help here!

Usage

1
analyzeCDR3(x, fname = "6_Junction.txt", OK = NULL)

Arguments

x

the IMGThelper object

fname

the absolute position of the Junction file to analyze ( default( file.path(x$path, 6_Junction.txt')))

OK

which rows to process (default which(data$V.DOMAIN.Functionality == 'productive' & ! data$D.GENE.and.allele == "" & ! data$CDR3.IMGT == "" & ! data$CDR3.IMGT == "NA"))


stela2502/IMGThelper documentation built on Nov. 5, 2019, 9:34 a.m.