RFclust.SGE-methods: description of function RFclust.SGE

In stela2502/RFclust.SGE: Unsupervised clustering using random forest run on SGE

description of function RFclust.SGE

Description

create a new RFclust.SGE object. The clustering will be performed on the columns of the data.frame.

Usage

RFclust.SGE(
  dat,
  ...,
  tmp.path = "",
  email = "",
  slices = 32,
  SGE = FALSE,
  slurm = FALSE,
  name = "RFclust",
  settings = list()
)

Arguments

dat	dgCMatrix containing all expression data
tmp.path	where to store the temporaray files
slices	how many threads to span
SGE	whether to use the Sun Grid Engine to calcualate
slurm	whether to use the slurm grid engine to crunch the data (default =F)
settings	the settings for the SLURM process (only 'A', 't' and 'p' are used)

Value

A new RFclust.SGE object

stela2502/RFclust.SGE documentation built on May 26, 2023, 2:31 a.m.