calculate.RF-methods: description of function calculate.RF

In stela2502/RFclust.SGE: Unsupervised clustering using random forest run on SGE

description of function calculate.RF

Description

This function is the threadable random forest function.

The return of this fucntion should be stored to a file using save.RF

and later on during the clean up of the different threads be read using read.RF

The return list can be processed using the RFdist method

Usage

calculate.RF(
  datRF = NULL,
  mtry1 = 3,
  no.rep = 20,
  no.tree = 500,
  addcl1 = TRUE,
  addcl2 = FALSE,
  imp = T,
  oob.prox1 = T,
  max.syn = 50
)

Arguments

datRF	the summary object is a list of random forest return values default= NULL
mtry1	Number of variables randomly sampled as candidates at each split. default=3
no.rep	how many times shoul the random forest function be called default= 20
no.tree	the numer of trees in the random forest function default= 500
addcl1	synthetic data created by the synthetic1 function default=TRUE
addcl2	synthetic data created by the synthetic2 function default=FALSE
imp	whether to calculate the importance default=T
oob.prox1	leave it like that default=T
max.syn	max synthetic data width default=50

stela2502/RFclust.SGE documentation built on May 26, 2023, 2:31 a.m.