stemangiola/sccomp: Robust Outlier-aware Estimation of Composition and Heterogeneity for Single-cell Data

A robust and outlier-aware method for testing differential tissue composition from single-cell data. This model can infer changes in tissue composition and heterogeneity, and can produce realistic data simulations based on any existing dataset. This model can also transfer knowledge from a large set of integrated datasets to increase accuracy further.

Getting started

Package details

Bioconductor views Clustering GeneExpression ImmunoOncology Normalization RNASeq Sequencing SingleCell Software Transcriptomics
Maintainer
LicenseGPL-3
Version1.7.12
URL https://github.com/stemangiola/sccomp
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("stemangiola/sccomp")
stemangiola/sccomp documentation built on May 7, 2024, 5:10 p.m.