stemangiola/tidySE: Brings SummarizedExperiment to the Tidyverse

The tidySummarizedExperiment package provides a set of tools for creating and manipulating tidy data representations of SummarizedExperiment objects. SummarizedExperiment is a widely used data structure in bioinformatics for storing high-throughput genomic data, such as gene expression or DNA sequencing data. The tidySummarizedExperiment package introduces a tidy framework for working with SummarizedExperiment objects. It allows users to convert their data into a tidy format, where each observation is a row and each variable is a column. This tidy representation simplifies data manipulation, integration with other tidyverse packages, and enables seamless integration with the broader ecosystem of tidy tools for data analysis.

Getting started

Package details

Bioconductor views AssayDomain Clustering DifferentialExpression GeneExpression Infrastructure Normalization QualityControl RNASeq Sequencing Transcription Transcriptomics
Maintainer
LicenseGPL-3
Version1.15.1
URL https://github.com/stemangiola/tidySummarizedExperiment
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("stemangiola/tidySE")
stemangiola/tidySE documentation built on June 2, 2024, 9:51 a.m.