Man pages for stephaniehicks/quantroSim
Supporting Data Simulation R-package for quantro
| getMethylSet | Export the simulateMethObject to a MethylSet to be used in... |
| langmuirGExArrays | Langmuir parameters for gene expression using arrays |
| langmuirMethArrays | Langmuir parameters for DNA Methylation Arrays |
| langmuirTrans | Langmuir adsorption transformation |
| list.GEx.platforms | List of platforms available to simulate gene expression data |
| list.meth.platforms | List of platforms available to simulate DNA methylation data |
| pickLangmuir | Simulate parameters from the Langmuir Adsorption model |
| pickLogNormal | Simulate the log normal values |
| pickNormalMix | Simulate a mixture of normal distributions |
| plotGEx | Plot the simulated gene expression arrays or RNA-Sequencing |
| plotGExTruth | Plot the 'simulateGExTruthObject' from 'simulateGExTruth' |
| plotMeth | Plot the simulated DNA methylation arrays |
| plotMethTruth | Plot the 'simulateMethTruthObject' from 'simulateMethTruth' |
| simulateGEx | Simulate observed gene expression data for a set of samples |
| simulateGExTruth | Simulate true gene expression data for a set of groups |
| simulateMeth | Simulate observed DNA methylation data for a set of samples |
| simulateMethTruth | Simulate true DNA methylation data for a set of groups |
