Analyzed data from PureHoney plates 541 and 542, this data has been through the QC process and is ready to be analyzed and plotted for results visualization.
1 |
A data frame with 30 variables:
run
study run id
sample_id
study level unique sample id
cell_type
type of cell
donor
cell donor name
donor_pheno
phenotype of cell donor
media
base media used
tx_run
paste of tx_cmpd
and run
tx_treat
challenge condition
tx_cmpd
compound id
tx_conc
concentration of tx_cmp
in uM
imaging_plate
culture/imaging plate id
imaging_well
culture/imaging well id
assay_plate
assay plate id
assay_prun
assay read/run id
assay_well
assay well id
plate_run
paste of assay_plate
and assay_prun
contents
assay_plate
level sample id
targ
analyte/target measured
iso_label
is targ
isotopicly labeled?
curve_id
standard curve used
curve_plot
targ
base name, used for plotting both species together
conc
concentration targ
in nM
in_range
is conc
in the range of detection?
recov
fraction of internal standard measured
conc_corrected
conc / recov
nuc_well
count of nuclei per imaging_plate:imaging_well
cell_vol_well_L
nuc_well * (3.4 * 10^-12)
for hepatocytes
conc_nmols
conc * (.0001 + cell_volume_well_L)
conc_incell_nM
conc_nmols / cell_volume_well_L
conc_incell_uM
conc_incell_nM / 1000
For futher details talk to Nate (nathan.day@hemoshear.com)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.