Description Usage Arguments Examples
High level wrapper function that that imports the assay layout for PureHoney as a tibble. Uses fixed offset from document markers to capture specific regions, prone to errors if assay document template is altered.
1 2 3 | readPHAssay(layout_file, plate_ids = NULL, meta_cols = c(1, 3:5),
meta_names = c("contents", "sample_id", "imaging_plate", "imaging_well"),
skip = 10)
|
layout_file |
Path to .xlsx file with PureHoney assay layout. |
plate_ids |
Optional character vector to extract only specific plate(s) from multi-plate document. |
meta_cols |
Numeric vector defining the columns to extract for meta section. Default is most common arrangment. |
meta_names |
Character vector defining column names for meta section. Length must match |
skip |
Number of rows to ignore when looking for plates. Useful for avoiding standard curve references in the header. |
1 | meta <- readPHAssay("CoA plates 100000537_100000538_RNO02004_PAH0119_6-29-17.xlsx")
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