ConductMultipleSurveys <- structure(
function # Conduct multiple simulations of a bus-route survey
###############################################################################
# File: ConductMultipleSurveys.R
## author<< Steven H. Ranney
## Contact: \email{sranney@gw-env.com}
# Created: 3/25/14/13
# Last Edited: 4/9/14 by SHR
##description<<This function uses \code{MakeAnglers} and \code{GetTotalValues}
## to conduct multiple bus-route or traditional access point creel surveys (from
## the number provided to the \code{nsims} argument) of a population of anglers.
# Returns: Estimate catch (Ehat), the catch rate calculated by the ratio of means,
# the true, observed catch, and the actual catch rate (meanLambda).
#
# TODO: add testing section
###############################################################################
(nsims, ##<<The number of simulations to be conducted in the simulation of interest.
... ##<<Arguments to be passed to other subfunctions
){
##details<<Because this function is merely a wrapper for the \code{\link{SimulateBusRoute}}
## code, the user still needs to set \code{startTime}, \code{waitTime},
## \code{nanglers}, \code{nsites}, and \code{samplingProb} as objects. These
## can be passed through the \code{...} argument or through setting \code{waitTime}
## and others outside of the function call itself.
busRoute <- as.data.frame(matrix(data = NA, ncol = 5, nrow = nsims, byrow=T))
names(busRoute) <- c("Ehat", "catchRateROM", "trueCatch", "trueEffort", "meanLambda")
##seealso<<\code{\link{MakeAnglers}}
##seealso<<\code{\link{GetTotalValues}}
##seealso<<\code{\link{SimulateBusRoute}}
for(i in 1:nrow(busRoute)){
busRoute[i,] <- SimulateBusRoute(...)
}
#busRoute <<- busRoute
return(busRoute)
}, ex = function() {
#These objects are not used directly in the ConductMultipleSurveys() function
# but will be used in the SimulateBusRoute() function
startTime <- c(1, 2,3,4,5)
waitTime <- c(.5, .5, .5, .5, 2)
nanglers <- c(10,10,10,10,50)
nsites <- 5
samplingProb <- .5
meanCatchRate <- 3
nsims <- 100
tmp <- ConductMultipleSurveys(100, startTime = startTime, waitTime = waitTime,
nanglers = nanglers, nsite = nsites,
samplingProb = samplingProb, meanCatchRate = meanCatchRate)
#To change fishingDayLength used in the MakeAnglers function
ConductMultipleSurveys(nsims, startTime, waitTime, nanglers, nsites, samplingProb,
meanCatchRate, fishingDayLength = 9.5)
})
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