API for steverozen/mSigHdp
Mutational signature discovery using HDP (hierarchical Dirichlet process)
| Global functions | |
|---|---|
| Burnin | Man page Source code |
| CleanChlist | Man page Source code |
| CombineChainsAndExtractSigs | Man page Source code |
| ComponentDiagnosticPlotting | Man page Source code |
| ExtendBurnin | Man page Source code |
| GenerateAverageCluster | Man page Source code |
| GeneratePriorppindex | Man page Source code |
| Generateppindex | Man page Source code |
| GetInputCatalogAsMatrix | Source code |
| GetPossibleICAMSCatalog | Source code |
| GibbsSamplingAfterBurnin | Man page Source code |
| ParallelGibbsSample | Man page Source code |
| PlotSamplesHighSigExp | Man page Source code |
| PrepInit | Man page Source code |
| RunHdpxParallel | Man page Source code |
| SaveAnalysis | Man page Source code |
| SetupAndActivate | Man page Source code |
| SetupAndPosterior | Man page Source code |
| downsample | Man page Source code |
| downsample_spectra | Man page Source code |
| show_downsample_curves | Man page Source code |
