Files in stineb/rsofun
The P-Model and BiomeE Modelling Framework

.Rbuildignore
.github/workflows/R-CMD-check.yaml
.github/workflows/deploy_docs.yaml
.github/workflows/test-coverage.yaml
.gitignore
COPYING
CRAN-SUBMISSION
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md R/calib_sofun.R R/cost_likelihood_biomee.R R/cost_likelihood_pmodel.R R/cost_rmse_biomee.R R/cost_rmse_pmodel.R R/data.R R/init_dates_dataframe.R R/run_biomee_f_bysite.R R/run_pmodel_f_bysite.R R/runread_biomee_f.R R/runread_pmodel_f.R R/zzz.R README.md
_pkgdown.yml
analysis/01-sensitivity-analysis.R analysis/02-bayesian-calibration.R analysis/03-uncertainty-estimation.R
analysis/paper_results_files/morrisOut_paper.rda
analysis/paper_results_files/par_calib_paper.rda
analysis/paper_results_files/pmodel_runs_paper.rda
cleanup
configure
cran-comments.md
data-raw/CH-LAE_forcing.rda
data-raw/README.md data-raw/generate_lm3ppa_driver_data.R
data/biomee_gs_leuning_drivers.rda
data/biomee_gs_leuning_output.rda
data/biomee_p_model_drivers.rda
data/biomee_p_model_output.rda
data/biomee_validation.rda
data/biomee_validation_2.rda
data/p_model_drivers.rda
data/p_model_drivers_vcmax25.rda
data/p_model_validation.rda
data/p_model_validation_vcmax25.rda
inst/CITATION
man/biomee_gs_leuning_drivers.Rd man/biomee_gs_leuning_output.Rd man/biomee_p_model_drivers.Rd man/biomee_p_model_output.Rd man/biomee_validation.Rd man/biomee_validation_2.Rd man/calib_sofun.Rd man/cost_likelihood_biomee.Rd man/cost_likelihood_pmodel.Rd man/cost_rmse_biomee.Rd man/cost_rmse_pmodel.Rd man/init_dates_dataframe.Rd man/p_model_drivers.Rd man/p_model_drivers_vcmax25.Rd man/p_model_validation.Rd man/p_model_validation_vcmax25.Rd man/run_biomee_f_bysite.Rd man/run_pmodel_f_bysite.Rd man/runread_biomee_f.Rd man/runread_pmodel_f.Rd
rsofun.Rproj
src/Makevars.in
src/Makevars.win
src/biosphere_biomee.mod.f90
src/biosphere_pmodel.mod.f90
src/classdefs.mod.f90
src/datatypes.mod.f90
src/forcing_siterun_biomee.mod.f90
src/forcing_siterun_pmodel.mod.f90
src/gpp_biomee.mod.f90
src/gpp_pmodel.mod.f90
src/grid_siterun.mod.f90
src/interface_biosphere_biomee.mod.f90
src/interface_biosphere_pmodel.mod.f90
src/params_core.mod.f90
src/params_siml_biomee.mod.f90
src/params_siml_pmodel.mod.f90
src/params_soil_biomee.mod.f90
src/photosynth_pmodel.mod.f90
src/plant_pmodel.mod.f90
src/sofun_r.f90
src/sofunutils.mod.f90
src/soil_biomee.mod.f90
src/soiltemp_sitch.mod.f90
src/tile_pmodel.mod.f90
src/vegdynamics_pmodel.mod.f90
src/vegetation_biomee.mod.f90
src/waterbal_splash.mod.f90
src/wrappersc.c
tests/testthat.R tests/testthat/test-ancillary-functions.R tests/testthat/test-calibration-biomee.R tests/testthat/test-calibration-pmodel.R tests/testthat/test-model-runs.R tests/testthat/test-quantitative-validation.R vignettes/biomee_use.Rmd vignettes/data_format.Rmd
vignettes/files/biomee_gs_leuning_output.rda
vignettes/files/biomee_p_model_output.rda
vignettes/files/biomee_p_model_output_calib.rda
vignettes/files/morrisOut.rda
vignettes/files/par_calib.rda
vignettes/files/pmodel_runs.rda
vignettes/new_cost_function.Rmd vignettes/pmodel_use.Rmd vignettes/sensitivity_analysis.Rmd
stineb/rsofun documentation built on Feb. 28, 2024, 1:05 a.m.