p_model_drivers: rsofun P-model driver data
In stineb/rsofun: The P-Model and BiomeE Modelling Framework
p_model_drivers R Documentation
rsofun P-model driver data
Description
Small tests dataset to validate if compiled code
and optimization routines can run
Usage
p_model_drivers
Format
A tibble of driver data:
- sitename
A character string containing the site name.
- forcing
A tibble of a time series of forcing climate data, including
the following variables:
- date
Date of the observation in YYYY-MM-DD format.
- temp
Daytime average air temperature in ^\circC.
- vpd
Daytime average vapour pressure deficit in Pa.
- ppfd
Photosynthetic photon flux density (PPFD) in
mol m^{-2} s^{-1}. If all values are NA, it indicates that
PPFD should be calculated by the SPLASH model.
- netrad
Net radiation in W m^{-2}. This is currently
ignored as a model forcing.
- patm
Atmospheric pressure in Pa.
- snow
Snow in water equivalents mm s^{-1}.
- rain
Rain as precipitation in liquid form in mm s^{-1}.
- tmin
Daily minimum air temperature in ^\circC.
- tmax
Daily maximum air temperature in ^\circC.
- fapar
Fraction of photosynthetic active radiation (fAPAR), taking
values between 0 and 1.
- co2
Atmospheric CO_2 concentration.
- ccov
Cloud coverage in %. This is only used when either PPFD or
net radiation are not prescribed.
- params_siml
A tibble of simulation parameters.
- spinup
A logical value indicating whether this simulation does spin-up.
- spinupyears
Number of spin-up years.
- recycle
Length of standard recycling period, in days.
- outdt
An integer indicating the output periodicity.
- ltre
A logical value, TRUE if evergreen tree.
- ltne
A logical value, TRUE if evergreen tree and N-fixing.
- ltrd
A logical value, TRUE if deciduous tree.
- ltnd
A logical value, TRUE if deciduous tree and N-fixing.
- lgr3
A logical value, TRUE if grass with C3 photosynthetic pathway.
- lgn3
A logical value, TRUE if grass with C3 photosynthetic
pathway and N-fixing.
- lgr4
A logical value, TRUE if grass with C4 photosynthetic pathway.
- site_info
A tibble containing site meta information.
- lon
Longitude of the site location in degrees east.
- lat
Latitude of the site location in degrees north.
- elv
Elevation of the site location, in meters above sea level.
- whc
A numeric value for the rooting zone water holding capacity (in mm)
Source
Pastorello, G., Trotta, C., Canfora, E. et al.
The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data.
Sci Data 7, 225 (2020). https://doi.org/10.1038/s41597-020-0534-3
University of East Anglia Climatic Research Unit; Harris, I.C.; Jones, P.D.; Osborn, T. (2021):
CRU TS4.05: Climatic Research Unit (CRU) Time-Series (TS) version 4.05 of high-resolution
gridded data of month-by-month variation in climate (Jan. 1901- Dec. 2020).
NERC EDS Centre for Environmental Data Analysis, date of citation.
https://catalogue.ceda.ac.uk/uuid/c26a65020a5e4b80b20018f148556681
Weedon, G. P., G. Balsamo, N. Bellouin,S. Gomes, M. J. Best, and P. Viterbo(2014),
The WFDEI meteorologicalforcing data set: WATCH Forcing Datamethodology applied
to ERA-Interimreanalysis data,
Water Resour. Res.,50,7505–7514, doi:10.1002/2014WR015638.
Fick, S.E. and R.J. Hijmans, 2017. WorldClim 2: new 1km spatial resolution climate
surfaces for global land areas. International Journal of Climatology 37 (12): 4302-4315.
stineb/rsofun documentation built on April 29, 2024, 1:29 p.m.
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| p_model_drivers | R Documentation |
rsofun P-model driver data
Description
Small tests dataset to validate if compiled code and optimization routines can run
Usage
p_model_drivers
Format
A tibble of driver data:
- sitename
A character string containing the site name.
- forcing
A tibble of a time series of forcing climate data, including the following variables:
- date
Date of the observation in YYYY-MM-DD format.
- temp
Daytime average air temperature in
^\circC.- vpd
Daytime average vapour pressure deficit in Pa.
- ppfd
Photosynthetic photon flux density (PPFD) in mol m
^{-2}s^{-1}. If all values are NA, it indicates that PPFD should be calculated by the SPLASH model.- netrad
Net radiation in W m
^{-2}. This is currently ignored as a model forcing.- patm
Atmospheric pressure in Pa.
- snow
Snow in water equivalents mm s
^{-1}.- rain
Rain as precipitation in liquid form in mm s
^{-1}.- tmin
Daily minimum air temperature in
^\circC.- tmax
Daily maximum air temperature in
^\circC.- fapar
Fraction of photosynthetic active radiation (fAPAR), taking values between 0 and 1.
- co2
Atmospheric CO
_2concentration.- ccov
Cloud coverage in %. This is only used when either PPFD or net radiation are not prescribed.
- params_siml
A tibble of simulation parameters.
- spinup
A logical value indicating whether this simulation does spin-up.
- spinupyears
Number of spin-up years.
- recycle
Length of standard recycling period, in days.
- outdt
An integer indicating the output periodicity.
- ltre
A logical value,
TRUEif evergreen tree.- ltne
A logical value,
TRUEif evergreen tree and N-fixing.- ltrd
A logical value,
TRUEif deciduous tree.- ltnd
A logical value,
TRUEif deciduous tree and N-fixing.- lgr3
A logical value,
TRUEif grass with C3 photosynthetic pathway.- lgn3
A logical value,
TRUEif grass with C3 photosynthetic pathway and N-fixing.- lgr4
A logical value,
TRUEif grass with C4 photosynthetic pathway.
- site_info
A tibble containing site meta information.
- lon
Longitude of the site location in degrees east.
- lat
Latitude of the site location in degrees north.
- elv
Elevation of the site location, in meters above sea level.
- whc
A numeric value for the rooting zone water holding capacity (in mm)
Source
Pastorello, G., Trotta, C., Canfora, E. et al. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data. Sci Data 7, 225 (2020). https://doi.org/10.1038/s41597-020-0534-3
University of East Anglia Climatic Research Unit; Harris, I.C.; Jones, P.D.; Osborn, T. (2021): CRU TS4.05: Climatic Research Unit (CRU) Time-Series (TS) version 4.05 of high-resolution gridded data of month-by-month variation in climate (Jan. 1901- Dec. 2020). NERC EDS Centre for Environmental Data Analysis, date of citation. https://catalogue.ceda.ac.uk/uuid/c26a65020a5e4b80b20018f148556681
Weedon, G. P., G. Balsamo, N. Bellouin,S. Gomes, M. J. Best, and P. Viterbo(2014), The WFDEI meteorologicalforcing data set: WATCH Forcing Datamethodology applied to ERA-Interimreanalysis data, Water Resour. Res.,50,7505–7514, doi:10.1002/2014WR015638.
Fick, S.E. and R.J. Hijmans, 2017. WorldClim 2: new 1km spatial resolution climate surfaces for global land areas. International Journal of Climatology 37 (12): 4302-4315.
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