In stranda/unpakathon: Code Used and Data Needed to work with unpak data

Three levels of experimental organization

Each experiment unpak conducts is given a different experiment name, '1a1'. These can be nested within a meta.experiment name (such as '1' for the experiment above). In addition it is possible to specify a block within each experiment. This provides two levels of hierarchy in the experiments, though these levels might not always be treated the same.

library(igraph)
library(unpakathon)

The following figure shows the relationship among meta experiments and the sub-components. Many of the sub-components have blocking which though not shown here can be accessed in builtin R dataframes as the column 'block'

map=unique(phenolong[,c("experiment","meta.experiment")])
map=map[map[,2]!="farm",]
plot(graph_from_data_frame(map))

stranda/unpakathon documentation built on Nov. 9, 2021, 7:48 a.m.