plotChrom: plot a phenotype along a chromosome

Description Usage Arguments

View source: R/plot_chrom.R

Description

plot a phenotype along a chromosome

Usage

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plotChrom(
  pheno,
  adjust = c(0, 1, 2, 3)[2],
  chromo = 1,
  meta = c("3"),
  span = 1,
  lines = NULL
)

Arguments

pheno

is a phenotype

adjust

is an integer that describes how phenotypes are adjusted. 0=raw, 1=Columbia mean, 2=Phytometer mean, 3=All plant mean

chromo

integer 1-5 corresponding to Arabidopsis chromosome number

meta

the meta experiment default experiment 3. Can be a vector

span

amount of line smoothing. smaller is wigglyier


stranda/unpakathon documentation built on Nov. 9, 2021, 7:48 a.m.