RVsharingProb: RVsharingProb Class

Description Arguments Author(s)

Description

An object created by RVsharing

Arguments

pshare

probability that the carriers in the pedigree (or all final descendants in the pedigree if carriers == NULL) share a rare variant given that a rare variant has been detected in any subject in the union of the carriers and the final descendants of the pedigree.

iancestors

Character vector of the IDs of branching individuals (intermediate ancestors): subjects who are ancestors to final descendants through two or more of their children and have ancestors above them in the pedigree. The only exception is that one of the top founders is designated as the last branching individual.

desfounders

List of vectors. Each final descendant has a vector in the list containing the distances to the founders above him.

id

Character vector of subject IDs.

dad.id

Character vector of father IDs for the subjects in id.

mom.id

Character vector of mother IDs for the subjects in id.

carriers

Character or numeric vector of subjects carrying the rare variant among all final descendants. May be NULL.

Author(s)

Alexandre Bureau <alexandre.bureau@msp.ulaval.ca>


syounkin/RVsharing documentation built on May 31, 2019, 12:47 a.m.