commonProp: Calculating the proportion of maximum intersection (PMI)

Description Usage Arguments Details Value

Description

Finds the relative proportion of common samples between clusters from different algorithms, i.e. (A ∩ B)/min{|A|, |B|}. Then calculates the euclidean and cosine distance metrics for the propotions. Creates a pdf heatmap to show distances.

Usage

1

Arguments

l

The output of a call to performClust.

Details

Not intended for use outside of a call to polyCluster.

Value

Returns an updated list l.


syspremed/polyClustR documentation built on May 31, 2019, 12:49 a.m.