performClust: polyCluster clustering
In syspremed/polyClustR: polyClustR: A pipeline to reconcile clustering solutions
Description
Usage
Arguments
Details
Value
Description
Performs clustering via the nmf and CCP functions.
Also calculates gap score and cophenetic corellation coefficient for each consensus matrix,
and creates pdf plots of these.
Usage
1
performClust(l, nmfData = NULL)
Arguments
l
A list of parameters required to carry out the clustering
nmfData
Character string. File path to the result of a previous NMF clustering by this function, in order to save time.
Details
Not intended for use outside of a call to polyCluster.
Value
Returns an updated list l.
syspremed/polyClustR documentation built on May 31, 2019, 12:49 a.m.
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Description Usage Arguments Details Value
Description
Performs clustering via the nmf and CCP functions.
Also calculates gap score and cophenetic corellation coefficient for each consensus matrix,
and creates pdf plots of these.
Usage
1 | performClust(l, nmfData = NULL)
|
Arguments
l |
A list of parameters required to carry out the clustering |
nmfData |
Character string. File path to the result of a previous NMF clustering by this function, in order to save time. |
Details
Not intended for use outside of a call to polyCluster.
Value
Returns an updated list l.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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