API for tallulandrews/TreeOfCells
Inferring the Tree of Cells
| Global functions | |
|---|---|
| FS_fold_change_sig | Source code |
| KL_Poisson | Source code |
| apply_feature_selection | Man page Source code |
| base_dist | Man page Source code |
| calculate_summary_values | Man page Source code |
| check_merged_profiles | Source code |
| check_profiles | Source code |
| check_row_col_names | Man page Source code |
| col_mean_aggregate | Man page Source code |
| col_var_aggregate | Man page Source code |
| convert_to_integer | Man page Source code |
| cosine_dist | Man page Source code |
| distribution_olap_fs | Man page Source code |
| dmat_wrapper | Source code |
| dropout_fs | Man page Source code |
| factor_counts | Man page Source code |
| fit_NB_to_matrix | Man page Source code |
| fit_ZINB_to_SCE | Man page Source code |
| fit_ZINB_to_matrix | Man page Source code |
| fit_zero_inflated_negative_binomial | Man page Source code |
| fold_change_fs | Man page Source code |
| gene_length_norm | Man page Source code |
| get_bins | Source code |
| get_val_mat_for_dist | Source code |
| get_val_mat_for_fs | Source code |
| log_transform | Man page Source code |
| merge_across_protocols | Man page Source code |
| merge_lists | Man page Source code |
| merge_profiles | Man page Source code |
| normalize_feature_selection | Source code |
| pearson_dist | Man page Source code |
| phis_dist | Man page Source code |
| quantile_norm | Man page |
| rhop_dist | Man page Source code |
| row_mean_aggregate | Man page Source code |
| row_var_aggregate | Man page Source code |
| scaled_regression | Man page Source code |
| scnorm | Man page |
| sctrans | Man page |
| spearman_dist | Man page Source code |
| top_diff_fs | Man page Source code |
| total_norm | Man page Source code |
| tree_of_cells | Man page Source code |
