Inferring the Tree of Cells

calculate_summary_values | Calculate Summary Statistics |

check_row_col_names | Check a matrix had row and column names |

convert_to_integer | Turn a matrix of expression values into integer counts |

Distances | Calculate Summary Statistics |

factor_counts | Fequency of factor levels |

FeatureSelection | Profile Feature Selection Methods |

fit_ZINB | Calculate Summary Statistics |

Merging | Merge Profiles |

ModifyMergedProfiles | Apply Feature Selection |

Normalizations | Profile Normalization Methods |

row_mean_aggregate | Row/Column Means/Variances by Factor |

tree_of_cells | Build Tree of Cells |

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