clustGuides: Cluster guideRNAs
In tanaylab/repguide: Design CRISPR guide RNAs against DNA repetitive sequences

Description Usage Arguments Value See Also Examples

Clusters guides based on their target binding profile

1	clustGuides(guideSet, min_Son = 0, n_clust = 15, alpha = 10)

`guideSet`	guideSet containing guide mappings
`min_Son`	Numeric from 0 through 1. Only considers genomic target binding sites above `min_Son` score.
`n_clust`	Integer from 1 to 20. Number of clusters to group guides into. Passed to `cutree()` function.

guideSet object with clustered guides.

addGuides(), and plotGuides()

## Not run: 
gs <- createGuideSet(Hsapiens, tes = te_annotation_df)
gs <- addTargets(gs, targets = 'LTR13A')
gs <- addGuides(gs, guide_length = 16)
gs <- compClusts(gs, min_Son = 0.25, n_clust = 10)
gs <- plotGuides(gs)

## End(Not run)