tdhock/PeakSegJoint: Joint Peak Detection in Several ChIP-Seq Samples
Version 2018.01.09

Jointly segment several ChIP-seq samples to find the peaks which are the same and different across samples. The fast approximate maximum Poisson likelihood algorithm is described in "PeakSegJoint: fast supervised peak detection via joint segmentation of multiple count data samples" by TD Hocking and G Bourque.

Getting started

Package details

AuthorToby Dylan Hocking
MaintainerToby Dylan Hocking <[email protected]>
LicenseGPL-3
Version2018.01.09
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("tdhock/PeakSegJoint")
tdhock/PeakSegJoint documentation built on Jan. 12, 2018, 4:04 p.m.