smoothers: smoothers
In tdhock/bams: Breakpoint annotation model smoothing
Description
This is a list of functions, each of which must return a matrix of
smoothed profiles. The first argument of each function is a
data.frame that represents a copy number profile, with at least
columns: position logratio chromosome. We assume that positions
are already sorted in ascending order p_1 < p_2. The second
argument to each of these functions should be a vector of
smoothing parameters, and there should be a default value. The
matrix returned has 1 row for each parameter, and 1 column for
each position.
Usage
1
"smoothers"
tdhock/bams documentation built on May 31, 2019, 7:34 a.m.
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Description
This is a list of functions, each of which must return a matrix of smoothed profiles. The first argument of each function is a data.frame that represents a copy number profile, with at least columns: position logratio chromosome. We assume that positions are already sorted in ascending order p_1 < p_2. The second argument to each of these functions should be a vector of smoothing parameters, and there should be a default value. The matrix returned has 1 row for each parameter, and 1 column for each position.
Usage
1 | "smoothers"
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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