run.smoothers: run smoothers
In tdhock/bams: Breakpoint annotation model smoothing

Description Usage Arguments Value Author(s)

Run several smoothers on a profile, quantifying agreement of the smoother with breakpoint annotations.

run.smoothers(profile, breakpoint.labels, smooth.funs = smoothers, 
    loss = several.breakpoints, tosave = c("errors", "seconds", 
        "parameters", "breakpoint.labels"), db = file.path(Sys.getenv("HOME"), 
        "smooth"))

`profile`	Profile data.frame.
`breakpoint.labels`	Annotation data.frame.
`smooth.funs`	List of smoothing functions to apply to the profile.
`loss`	Loss function of (breakpoint counts,labels) — both matrices nparam x nlabels, and should return numeric matrix of same size.
`tosave`	Variables to save to the db directory.
`db`	Location to save gzipped result files.