occurance_table: Occurance table of data points in a list of biclusters

In tdrose/mosbi: Molecular Signature identification using Biclustering

Occurance table of data points in a list of biclusters

Description

The function uses the occurance_matrix function and returns all values higher than the threshold as a DataFrame.

Usage

occurance_table(bics, mat, threshold = 0)

Arguments

bics	A list of bicluster objects.
mat	The data matrix used for biclustering.
threshold	Only data points higher than this threshold are returned.

Value

A DataFrame with the frequencies of occurance for values higher than a threshold.

Examples

m <- matrix(seq(1:16), nrow=4)
# m <- matrix(rnorm(10000), nrow=100)
# bics <- c(run_fabia(m), run_isa(m), run_plaid(m))
# occurance_table(bics, m, threshold=.1)

tdrose/mosbi documentation built on May 4, 2022, 3:22 p.m.