write_graphml: Save adjacency matrix as GraphML file
In tdrose/mosbi: Molecular Signature identification using Biclustering

write_graphml

R Documentation

Save adjacency matrix as GraphML file

Description

Save and adjacency matrix as returned by full_graph or 1 - distance_matrix as a GraphML file.

Usage

write_graphml(m, filename, cols)

Arguments

`m`	A symmetric numeric matrix (Adjacency matrix). Rownames are considered as node names.
`filename`	Name of the resulting GraphML file (should end with ".gml").
`cols`	Node colors.

Value

0 if successful.

Examples

m <- matrix(seq(1:16), nrow=4)
# m <- matrix(rnorm(10000), nrow=100)
# bics <- c(run_fabia(m), run_isa(m), run_plaid(m))
# bn <- bicluster_network(bics, m)
# write_graphml(apply_threshold(bn), "testfile.txt")

tdrose/mosbi documentation built on May 4, 2022, 3:22 p.m.