m_diversification_rates: Extract estimated diversification rates from a multistate...
In teofiln/utilhisse: A Collection of Functions for Summarising and Visualizing 'hisse' Results
Description
Usage
Arguments
Value
Examples
Description
A helper function that formats hisse::MuHiSSE's diversification parameter estimates into a data frame
Usage
1
m_diversification_rates(model_fit, states)
Arguments
model_fit
A muhisse fit object
states
A vector of observed character states
Value
The estimated diversification rates formatted in a data.frame
Examples
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States <- c("mp", "mb", "fp", "fb")
# muhisse model
data("diatoms")
m_diversification_rates(model_fit = diatoms$muhisse, states=States)
# CID8 model
m_diversification_rates(model_fit = diatoms$cid8, states=States)
# musse model, no hidden states
m_diversification_rates(model_fit = diatoms$musse, states = States)
teofiln/utilhisse documentation built on Sept. 3, 2020, 2:55 p.m.
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Description Usage Arguments Value Examples
Description
A helper function that formats hisse::MuHiSSE's diversification parameter estimates into a data frame
Usage
1 | m_diversification_rates(model_fit, states)
|
Arguments
model_fit |
A muhisse fit object |
states |
A vector of observed character states |
Value
The estimated diversification rates formatted in a data.frame
Examples
1 2 3 4 5 6 7 8 9 10 11 | States <- c("mp", "mb", "fp", "fb")
# muhisse model
data("diatoms")
m_diversification_rates(model_fit = diatoms$muhisse, states=States)
# CID8 model
m_diversification_rates(model_fit = diatoms$cid8, states=States)
# musse model, no hidden states
m_diversification_rates(model_fit = diatoms$musse, states = States)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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