DataProviderController: Control data sources

In terminological/uk-covid-datatools: Functions for sourcing, cleaning and calculating Rt for uk covid timeseries data

Description

Control data sources

Control data sources

Super class

ukcovidtools::PassthroughFilesystemCache -> DataProviderController

Methods

Public methods

• DataProviderController$new()

• DataProviderController$unloadCaches()

• DataProviderController$updateCodes()

• DataProviderController$updateSPIMDatasets()

• DataProviderController$updateDatasets()

• DataProviderController$timeseriesProcessor()

• DataProviderController$chessProcessor()

• DataProviderController$survivalProcessor()

• DataProviderController$metawardProcessor()

• DataProviderController$loadSpimSources()

• DataProviderController$fileProvider()

• DataProviderController$clone()

Inherited methods

• ukcovidtools::PassthroughFilesystemCache$getDaily()

• ukcovidtools::PassthroughFilesystemCache$getHashCached()

• ukcovidtools::PassthroughFilesystemCache$getSaved()

• ukcovidtools::PassthroughFilesystemCache$unloadCache()

---

Method new()

New provider controller

Usage

DataProviderController$new(wd)

Arguments

wd

a shared cache directory for all uk-covid-datatools

...

for compatibility

Returns

the provider controller Title

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Method unloadCaches()

Usage

DataProviderController$unloadCaches()

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Method updateCodes()

Usage

DataProviderController$updateCodes()

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Method updateSPIMDatasets()

Usage

DataProviderController$updateSPIMDatasets()

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Method updateDatasets()

Usage

DataProviderController$updateDatasets()

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Method timeseriesProcessor()

Usage

DataProviderController$timeseriesProcessor(...)

---

Method chessProcessor()

Usage

DataProviderController$chessProcessor(...)

---

Method survivalProcessor()

Usage

DataProviderController$survivalProcessor(...)

---

Method metawardProcessor()

Usage

DataProviderController$metawardProcessor(...)

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Method loadSpimSources()

Usage

DataProviderController$loadSpimSources(fileProvider, ...)

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Method fileProvider()

Usage

DataProviderController$fileProvider(
  name,
  configFile = getOption("ukcovid.config"),
  nocache = FALSE,
  ...
)

Arguments

name

configFile

Returns

---

Method clone()

The objects of this class are cloneable with this method.

Usage

DataProviderController$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

terminological/uk-covid-datatools documentation built on June 24, 2021, 8:16 p.m.