initialize.jheem: Initializes a new controller for JHEEM

In tfojo1/jheem: Executes the JHEEM (Johns Hopkins Epidemiological and Economic Model) - a compartmental model of HIV

Initializes a new controller for JHEEM

Description

Initializes a new controller for JHEEM

Usage

initialize.jheem(
  version,
  age.cutoffs = NULL,
  race.strata = NULL,
  locations = NULL,
  subpopulations = NULL,
  sex.strata = NULL,
  risk.strata = NULL,
  continuum.of.care.states = NULL,
  cd4.strata = NULL,
  hiv.subsets = NULL,
  nonhiv.subsets = NULL,
  first.diagnosed.hiv.continuum.states = NULL,
  all.diagnosed.hiv.continuum.states = first.diagnosed.hiv.continuum.states,
  transmission.route.names = "sexual",
  verbose = T,
  new.diagnoses.keep.dimensions = c("age", "race", "subpopulation", "sex", "risk")
)

Arguments

version	An identified of the version, however that is specified by the user. Recorded here for convenience of access later
age.cutoffs	The cut points for age stratifications in the model, in years. Will result in length(age.cutoffs)-1 strata: age.cutoffs[1] (inclusive) to age.cutoffs[2] (exclusive), age.cutoffs[2] to age.cutoffs[3], ..., age.cutoffs[n-1] to age.cutoffs[n]

tfojo1/jheem documentation built on Oct. 7, 2022, 1:24 p.m.