Description Objects from the Class Slots Methods Author(s) See Also Examples

Container for storing Venn intersect results created by the `overLapper`

function.
The `setlist`

slot stores the original label sets as `vectors`

in a `list`

;
`intersectmatrix`

organizes the label sets in a present-absent matrix; `complexitylevels`

represents the number of comparisons considered for each comparison set as vector of integers;
and `vennlist`

contains the Venn intersect vectors.

Objects can be created by calls of the form `new("VENNset", ...)`

.

`setlist`

:Object of class

`"list"`

:`list`

of`vectors`

`intersectmatrix`

:Object of class

`"matrix"`

: binary`matrix`

`complexitylevels`

:Object of class

`"integer"`

:`vector`

of`integers`

`vennlist`

:Object of class

`"list"`

:`list`

of`vectors`

- as.list
`signature(x = "VENNset")`

: coerces`VENNset`

to`list`

- coerce
`signature(from = "list", to = "VENNset")`

:`as(list, "VENNset")`

- complexitylevels
`signature(x = "VENNset")`

: extracts data from`complexitylevels`

slot- intersectmatrix
`signature(x = "VENNset")`

: extracts data from`intersectmatrix`

slot- length
`signature(x = "VENNset")`

: returns number of original label sets- names
`signature(x = "VENNset")`

: extracts slot names- setlist
`signature(x = "VENNset")`

: extracts data from`setlist`

slot- show
`signature(object = "VENNset")`

: summary view of`VENNset`

objects- vennlist
`signature(x = "VENNset")`

: extracts data from`vennset`

slot

Thomas Girke

`overLapper`

, `vennPlot`

, `olBarplot`

, `INTERSECTset-class`

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | ```
showClass("VENNset")
## Sample data
setlist <- list(A=sample(letters, 18), B=sample(letters, 16),
C=sample(letters, 20), D=sample(letters, 22),
E=sample(letters, 18), F=sample(letters, 22))
## Create VENNset
vennset <- overLapper(setlist[1:5], type="vennsets")
class(vennset)
## Accessor methods for VENNset/INTERSECTset objects
names(vennset)
setlist(vennset)
intersectmatrix(vennset)
complexitylevels(vennset)
vennlist(vennset)
## Coerce VENNset/INTERSECTset object to list
as.list(vennset)
``` |

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.