find_similar_pathways: Find pathways that overlap with a reference pathway.

Description Usage Arguments Value

View source: R/get_reactome_pathways.R

Description

Find pathways that overlap with a reference pathway.

Usage

1
find_similar_pathways(pathway_list, pathway, threshold = 0.9)

Arguments

pathway_list

A list of pathways obtained from get_reactome_pathways.

pathway

A reference pathway.

threshold

A percentage between 0 and 1. If two pathways overlap by more than this amount, then they are considered similar.

Value

The indices to pathway_list that contain pathways similar to the reference pathway.


tgrimes/miscgene documentation built on May 24, 2020, 5:31 a.m.