getSignatureTypeList: Obtain a list of signatures

In theMILOlab/SPATA2: A Toolbox for Spatial Expression Analysis

Obtain a list of signatures

Description

Retrieves a list of signatures sorted by molecular type as present in the given object.

Usage

getSignatureTypeList(object, signatures = NULL)

Arguments

object	An object of class SPATA2 or, in case of S4 generics, objects of classes for which a method has been defined.
signatures	A character vector specifying the subset of signatures to include in the output (default: NULL).

Details

This function categorizes signatures into different types based on the provided object. If the 'signatures' argument is provided as a character vector, the function returns only the specified signatures categorized by assay type. Otherwise, it returns all signatures categorized by type.

Value

A list containing the names of signatures categorized by assay type.

See Also

Documentation of slot @signatures in the MolecularAssay-class.

theMILOlab/SPATA2 documentation built on Feb. 8, 2025, 11:41 p.m.