read_data_files_shiny: Reads cell track data

In theMILOlab/cypro: A Toolbox for Analysis of Single Cell Microscopy Data

Reads cell track data

Description

A function to be used for argument .f of purrr::map2().

1. Calls the respective reading function depending on the directory's ending.

2. Makes sure that all denoted variables exist

3. Makes sure that all denoted variables have valid content

Usage

read_data_files_shiny(
  directory,
  progress_n,
  progress,
  object,
  used_variable_names,
  assembled_module_info_lists,
  mitosis_module_used = FALSE
)

Arguments

directory	Character value. The directory from which to read the data.frame. of .x contains.
progress_n	Numeric value. Indicates the iterating progress.
progress	A shiny - R6 progress object.
assembled_module_info_lists	A list of three slots: 'identifier' = pdl_step_2_info_assembled() 'analysis_modules' = pdl_step_3_info_assembled(), 'additional' = pdl_step_4_info_assembled()

Value

The read in data.frame with three additional informative columns: well_roi, condition and cell_line.

theMILOlab/cypro documentation built on April 5, 2022, 2:03 a.m.