step_conditional: step_conditional

Description Usage Arguments Details Value Author(s)

Description

Step conditional

Usage

1
2
step_conditional(betas, ld_matrix, neffs, var_y, hwe_diag_outside, hwe_diag,
  return_entire_beta_set = F, exact = F, ses = NULL)

Arguments

betas

vector of betas that will be adjusted in the matrix operations.

ld_matrix

LD matrix for the subset of the region.

var_y

variance of of the phenotype

hwe_diag_outside

Diagonal matrix containing the genotypic variance

hwe_diag

Diagonal matrix containing the genotypic variance *n

neff

effective sample size for each SNP in the dataset

Details

Run a joint step of the analysis.

Value

Joint betas and standard errors.

Author(s)

James Boocock


theboocock/coco documentation built on May 31, 2019, 9:10 a.m.