Description Usage Format Source
A dataset containing the molecular characterization information of antibody sequences
1 |
A data frame with 801 rows and 28 variables:
sequence name
type of the chain, either heavy or light
V-gene information, with subfamily
D-gene information, with subfamily
J-gene information, with subfamily
blast evalue, les than 10e-3 is good
DNA strand, either '+' or '-'
FR1 sequence, in AA
CDR1 sequence, in AA
FR2 sequence, in AA
CDR2 sequence, in AA
FR3 sequence, in AA
CDR3 sequence, in AA
FR4 sequence, in AA
number of positive charges in CDR3
number of negative charges in CDR3
hydrophobicity in CDR3
number of positive charges in V-Region
number of negative charges in V-Region
hydrophobicity in V-Region
CDR3 length, in nt
V-REGION length, in nt
number of mutations in the V-region
b_cell_subset
the sample
the compartment
v gene - Family only
j gene - Family only
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