sqlite_view_qhchains: sqlite_view_qhchains
In thierrycnam/igfuns: Analyzes of Ig sequencing data
View source: R/sqlite_view_qhchains.R
Description
sqlite_view_qhchains
Usage
1
2
3
4
sqlite_view_qhchains(xh = 0.8, alnstart = 9,
cdhit_view_name = "cds_99", cdhit_dbtype = "nt",
cdhit_fraction = 100, depth = 1, group_by_clonotype = FALSE,
extras = "")
Arguments
xh
fraction for clonotypes
alnstart
alnstart
cdhit_view_name
cdhit view name
cdhit_dbtype
cdhit dbtype
cdhit_fraction
cdhit fraction
depth
depth
group_by_clonotype
boolean
extras
extra columns from heavy_chains table
thierrycnam/igfuns documentation built on May 4, 2020, 3:21 a.m.
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View source: R/sqlite_view_qhchains.R
Description
sqlite_view_qhchains
Usage
1 2 3 4 | sqlite_view_qhchains(xh = 0.8, alnstart = 9,
cdhit_view_name = "cds_99", cdhit_dbtype = "nt",
cdhit_fraction = 100, depth = 1, group_by_clonotype = FALSE,
extras = "")
|
Arguments
xh |
fraction for clonotypes |
alnstart |
alnstart |
cdhit_view_name |
cdhit view name |
cdhit_dbtype |
cdhit dbtype |
cdhit_fraction |
cdhit fraction |
depth |
depth |
group_by_clonotype |
boolean |
extras |
extra columns from heavy_chains table |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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