Man pages for thoree/mut2
Mutation stuff

boundsGammaUpper limit for overall mutation rate
distLRRFind summary statistics of LRR
expectedMutationRateExpected mutation rate of a mutation matrix
findReversibleFind reversible mutation matrix
fratioCalculates fratio
lik2Pairwise likelihood with mutation
mut2mut2: Transforming mutation models to reversibility
mut2-packagemut2: Mutation stuff
simLRRSimulate LRR
snpExampleSNP example
tabfRatioProduce table comparing transformations
tabLRRProduce table comparing transformations based on simulations
thoree/mut2 documentation built on June 11, 2025, 4:02 p.m.