mzIdentify_mass_dataset2: Identify peaks based on MS1 database

In tidymass/metid: Metabolite identification based on MS1 and MS2 spectra

Identify peaks based on MS1 database

Description

Identify peaks based on MS1 database.

Usage

mzIdentify_mass_dataset2(
  object,
  ms1.match.ppm = 25,
  rt.match.tol = 30,
  polarity = c("positive", "negative"),
  column = c("hilic", "rp"),
  candidate.num = 3,
  database,
  threads = 3
)

Arguments

object	A mass_dataset class object.
ms1.match.ppm	Precursor match ppm tolerance.
rt.match.tol	RT match tolerance.
polarity	The polarity of data, "positive"or "negative".
column	"hilic" (HILIC column) or "rp" (reverse phase).
candidate.num	The number of candidates.
database	MS1 database name or MS1 database.
threads	Number of threads

Value

A mzIdentifyClass or metIdentifyClass object.

Author(s)

Xiaotao Shen [e-mail]

See Also

The example and demo data of this function can be found https://tidymass.github.io/metid/articles/metid.html

tidymass/metid documentation built on Sept. 4, 2023, 2:01 a.m.